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Triggering Morel Fruiting
Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome … forest soils, but the nutritional association between mycorrhizal fungi and tree roots as well. This might be one of …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes … with a DGR, you gamble every time you mutate. But, perhaps, it works to keep throwing the dice. There’s some … support from the EMERGE Institute (NSF #2022070). Sequencing of the Stordalen Mire samples used herein was …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our … challenges.   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve spent millions of years …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access novel … cataloged and taxonomically classified to date. Under the “sequence to function’ umbrella, this symposium will further …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing resources, …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… grace under pressure.” Horst Simon touched upon the overheated server room and subsequent sprinkler incident at the aging Walnut Creek …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley … be measured by IR-spectroscopy and mass spectrometry in sequence in real time at an atomic resolution. We are … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Nigel Mouncey
Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth … the highest quality operational effectiveness of production sequencing, provides health and safety oversight at the JGI, … NJ & Kaplan S. (1998). Redox-dependent gene regulation in Rhodobacter sphaeroides 2.4.1(T): effects on dimethyl …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. The Science … pools, followed by whole genome amplification and shotgun sequencing. The team first tested the approach on bacterial … define as “any form of functional enrichment leading to the sequencing of genomes from either individual cells or …
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