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Draft Genomes of Geographically Distinct Strains and Progeny of the Ectomycorrhizal Basidiomycete Laccaria bicolor.
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The Integrated Microbial Genome Resource of Analysis
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High-resolution phylogenetic microbial community profiling
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A Comparison of Microbial Genome Web Portals
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … glasses, or a cane, but only Waldo will have all of these features. As described July 22, 2019, in  Nature … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the …
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Matt Blow
… Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training Wellcome Trust Sanger … 85(18):e01210-19 Price et al 2018. Mutant phenotypes for thousands of bacterial genes of unknown function. Nature 557:503-509. … Selected Publications …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material … a new pipeline for identifying viruses across many thousands of genomes and metagenomes, called geNomad (watch …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … on cotton production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Extracting the Secrets of Secondary Metabolites
… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … Ultimately, this process enables researchers to identify strains able to produce secondary metabolites within a lab …
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