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Learning to Look
Machine learning approach significantly expands inovirus … “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … are important from the standpoint of phage-bacterial coevolution and are also useful tools in CRISPR-Cas …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … Laboratory under US Department of Energy Contract DE-AC02-05CH11231, a Joint Genome Institute Community Science …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … allowed us to pinpoint and rank biologically relevant and evolutionarily conserved genes that could be potential …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … genomes of symbiotic species available: 73 saprotrophs and 62 mycorrhizal species. The 62 mycorrhizal species include 29 …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Pests, diseases, and aridity have shaped the genome of Corymbia citriodora
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … don’t have flagella, meaning they were lost in the evolutionary adaptation to marine environments. These …
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Atmospheric methane consumption in arid ecosystems acts as a reverse chimney and is accelerated by plant-methanotroph biomes
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Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … regulator, is modulated through a novel mechanism. Nucleic Acids Res. 44, 595-607. Otani, H., Lee, Y.E., Casabon, I., … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Genome of the Cyanobacterium Microcoleus vaginatusFGP-2, a Photosynthetic Ecosystem Engineer of Arid Land Soil Biocrusts Worldwide
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