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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… the way we found was to focus on comparison of expression levels between fungal trophic guilds,” said Lucas Auer, a …
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Exploring the limit of metazoan thermal tolerance via comparative proteomics: thermally induced changes in protein abundance by two hydrothermal vent polychaetes
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… tested a gene sequence-based predictor of gene expression levels using machine learning tools. “This was very exciting …
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Webinar: MycoCosm Tutorial
… collection of sequenced fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  … Program pages ( https://jgi.doe.gov/our-science/science-programs/fungal-genomics/ ). You can also contact us for … and TCDB ( http://tcdb.org/ ) databases, respectively. For secondary metabolism clusters, we have developed in-house …
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An amoeba and a cyanobacterium walk into a bar...
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Building Sphagnum Genomic Resources
… such as sphagnum’s associations with methane oxidizing bacteria, nutrient uptake, and its productivity and … genomes for seven novel species of Acidobacteria through an approved CSP proposal. The researchers … In addition, this work reflects a collaboration between two programs within different Divisions of the Office of …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides mccartyi and  Dehalobacter restrictus,  that work together to break down PCE … of contamination. By 2020, the water was at contamination levels that are below the minimum amount of what’s allowed …
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora
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Comparative transcriptomics of CAZy enzymes in white- and brown-rot agaricomycetes: Evolutionary insights into lignocellulose degradation and the relevance of GH16 glycoside hydrolase functional divergence
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of … hosted at the JGI through three different internship programs – some managed by the Lab – to learn more about …
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Nigel Mouncey
… private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has … Dr. Mouncey leads his own science group at JGI focused on secondary metabolites. He is also on the Leadership Team of … Nigel Mouncey is the Secondary Metabolites Program head as well as our JGI …
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