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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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New and Improved: Eucalyptus Reference is Now Accessible
… compared to the 2014 Eucalyptus grandis reference genome that has been widely adopted. The new genome assembly resolves … The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted … genome assembly and annotation. Genome contiguity of the 2025 phased reference and 2014 diploid genome reference was …
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Supercharging SIP in the Fungal Hyphosphere
… and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying … health can help mitigate the effects of climate change. The team’s study used samples from the area immediately … HT-SIP is a capability available to request through  the JGI proposal calls . …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific Computing at …
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Gene Expression: From On-Off Switch to Dial
… library approach to tuning gene expression in metabolic pathways. Compared to the traditional way, which leverages an … of essential genes in metabolic networks that were missed using traditional approaches. This novel form of … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. …
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities offered, proposal …
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SoyCSN: Soybean context‐specific network analysis and prediction based on tissue‐specific transcriptome data
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato
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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
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