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The Aegilops ventricosa 2NvS segment in bread wheat: cytology, genomics and breeding
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… (Berkeley Lab) hosted a pitch event promoting fully-supported summer research collaborations through the U.S. … for current faculty. Applying faculty members may invite up to two student participants from the faculty member’s …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these … sequenced? A:  For the next call ( CSP New Investigator ), up to 4 long-reads (PacBio) metagenomes can be included, … only works using subread data, PacBio is working on support to use CCS data as input. Data analysis Q:  What …
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JGI@25: Building a Better Bean
… common bean’s close relative, as a biofuel. To this end, a team of researchers led by Jeremy Schmutz of the JGI and the … farmers and a commercial crop for large producers. The team sequenced and assembled a 473-million basepair genome … retain their iron content and have a longer shelf-life — up to four years. Work is now underway to transfer the trait …
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Cultivating Symbiotic Antarctic Microbes
… to thrive in polar ecosystems. The work by Cavicchioli’s team sheds light on the range of archaeal symbiotic … Aenigmarchaeota, Nanoarchaeota, and Nanohaloarchaea) superphylum of extremophilic archaea first outlined by JGI … In the  Proceedings of the National Academy of Sciences , a team led by Rick Cavicchioli at the University of New South …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of … with the JGI’s growing efforts in establishing plant and fungal single-cell and spatial transcriptomic technologies, … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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The Case for Conservation
… question. In a recent Scientific Advances article , a team led by McDaniel and his former graduate student Sarah … be associated with a plant’s sex. One outcome could be superfemale plants that have increased fruit and seed yield. … Laboratory (Berkeley Lab), and at HudsonAlpha. As the team discussed in a JGI podcast episode about the work, the …
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JGI Announces 2026 Functional Genomics Recipients
… researchers the tools to build engineering applications in support of advancing the bioeconomy. This year's projects … to develop  applications ranging from engineering microbial enzymes that unlock novel biochemical pathways, to exploring … to advance U.S. energy independence and secure domestic supplies of materials essential to a growing bioeconomy. The …
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Leveraging a Structural Blueprint to Rationally Engineer the Rieske Oxygenase TsaM
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Effects of Polar Light Cycle on Microbial Food Web
… the polar regions to the deep ocean, cold environments occupy more space on Earth than any other ecosystem. Therefore, … decades. In these frigid systems, where organisms higher up in the food web like fish do not exist, nutrient cycling … water up top and anoxic water below. Cavicchioli and his team took samples from all three sections of the stratified …
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Building Sphagnum Genomic Resources
… researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon … in nutrient-poor, acidic and waterlogged environments, occupying every continent except Antarctica. Researchers … the carbon away from methanogens. In The ISME Journal, a team led by researchers from the University of Konstanz and …
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Learning to Look
… As described July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy … a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are stealth agents … known diversity of these viruses, genomic analyses led the team to propose that the Inoviridae should be classified as …
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