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… cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All SAR324 have very closely related …

… analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists … to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and … genomic data (MAGI) for functional annotation and identifying unknown compounds (Pactolus). …

… that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer … and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, FL, and FD (for bioinformatics) from …

… services and analysis—to participants. Over the past two years, Myco-Ed has been used in 15 individual classrooms … and data analysis. Starting with isolating and identifying fungi in the environment, students can prepare samples …

… Baldrian’s team was investigating. So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) … referencing the database, Baldrian’s team was able to identify enzymes in the soil and who made them. Based on data … by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth and Sports of …

… fragments. Additionally, CheckV was able to identify just over 17,000 contiguous sequences (contigs) of proviruses flanked …

… T., Rübel, O., Keasling, J., Northen, T., & Bowen, B. (2017). OpenMSI Arrayed Analysis Toolkit: analyzing spatially … Rubel, O., Prabhat, Mahoney, M., & Bowen, B. (2015). Identifying important ions and positions in mass spectrometry …

… filter the data for the major capsid protein (MCP) to identify NCLDV viruses. JGI researchers previously applied this …

… isotopes to measure carbon and nutrient flux, and identify microbes assimilating labeled compounds. During this … We do a hydrolyzation of the DNA and we look and quantify the isotopomers. We estimate the overall atom enrichment … to look at those masses, it makes it hard to identify the biomolecules in the mass spectrometer. If we’re using …

… served as JGI Interim Director from March 2016 – March 2017.   …