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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, … project that aligns with each intern’s interests or educational goals.  This year’s internship program was …
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An Automated Tool for Assessing Virus Data Quality
… and identified from environmental samples (metagenomes). However, the quality and completeness of … viruses and associate them with their microbial hosts. However, assembling viral genomes from metagenomes is … on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both …
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First Monoploid Reference Sequence of Sugarcane
… a single contiguous region. The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to … The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with more … draft genome sequence of the polyploid sugarcane variety R570. Among the numerous benefits expected from a genome …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… plant evolution. Recent findings in Ceratopteris richardii show a long history of dynamic evolution and rapid changes in … high-quality genome assemblies and annotations for 35 species representing all major evolutionary lineages in … hoarding and those long genes. And gene family analysis showed that genes directing development of reproductive …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… the University of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander Probst, Stephan …
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Four Researchers Join JGI User Executive Committee
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Picking Up Threads of Cotton Genomics
… production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and importance … States, cotton production centers around two varieties: 95 percent of what is grown is known as Upland cotton ( Gossypium hirsutum ), while the remaining 5 percent is called American Pima ( G. barbadense .) These …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… its enhanced neural network architecture, GenomeOcean has shown improved computational efficiency of its modeling in … You’d go find the cash converter box, feed it a $1, $5 or $10 bill and receive a set amount of tokens, … on reference genomes to train genome foundation models. However, the sheer vastness of microbial diversity is not …
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Steven Wilson
… Education …
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Atif Shahab
… Education …
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Tina Clarke
… June 2017 –  present Sr. Compensation Analyst, May 2015 –  present Joint Genome Institute (JGI) HR Partner, June … Berkeley, CA, Sr. HR Division Partner 2007 – May, 2015 Sybase (SAP Acquired Company), Dublin, CA, HR Manager 2000 … Education …
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