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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… to date.  This summer internship program, which began in 2014, pairs undergraduate and graduate students from UC … project that aligns with each intern’s interests or educational goals.  This year’s internship program was … I was so impressed with the work everyone has done.” The 2020 JGI-UC Merced interns and mentor/s: Brendan Blasius & …
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An Automated Tool for Assessing Virus Data Quality
… and identified from environmental samples (metagenomes). However, the quality and completeness of … viruses and associate them with their microbial hosts. However, assembling viral genomes from metagenomes is … suite, as well as sequences from the Global Ocean Virome 2.0 dataset based on open ocean samples. CheckV identified a …
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First Monoploid Reference Sequence of Sugarcane
… as a reference. The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with more … in sorghum. Based in part on these positive results, in 2017, JGI approved a CSP proposal from the international … of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… plant evolution. Recent findings in Ceratopteris richardii show a long history of dynamic evolution and rapid changes in … (Berkeley Lab) took on the Open Green Genome Initiative in 2018 as part of its Community Science Program. The OGG has … hoarding and those long genes. And gene family analysis showed that genes directing development of reproductive …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… Understanding (MoU) signed between UDE and Berkeley Lab in 2022, the delegation from UDE familiarized themselves with the …
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Four Researchers Join JGI User Executive Committee
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Picking Up Threads of Cotton Genomics
… All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in size, and are hybrids … lineages. Senior authors of the  paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and Jeremy …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… its enhanced neural network architecture, GenomeOcean has shown improved computational efficiency of its modeling in … on reference genomes to train genome foundation models. However, the sheer vastness of microbial diversity is not … conducted by JGI users. These datasets include an extensive 25-year study of microbial communities in freshwater …
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering Group … reach the associated goals. Mr. Wilson joined the JGI in 2002.  A fter supporting the sequencing core at Exelixis … Education …
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated … Education …
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Tina Clarke
… Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in … Sr. Compensation Analyst and Human Resources Partner, June 2017 –  present Sr. Compensation Analyst, May 2015 –  …
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