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A bloom of a single bacterium shapes the microbiome during outdoor diatom cultivation collapse
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Conserved environmental adaptations of stream microbiomes in the hyporheic zone across North America
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Animal-associated jumbo phages as widespread and active modulators of gut microbiome ecology and metabolism
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Fungus Fuels Tree Growth
… growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual … of particular interest to the U.S. Department of Energy (DOE). By better understanding how poplar responds to its … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … areas that require cleanup and long-term monitoring. The DOE has been similarly invested in environmental management, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Gut Fungi: Unexpected Source of Novel Chemicals
… expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the presence of … genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Collaborative Science Initiative and used resources at the DOE Joint Genome Institute and the Environmental Molecular …
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Digging into Microbial Ecosystems Deep Underground
… deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re … work builds off a proposal approved through a collaborative science initiative called Facilities Integrating … due March 16, 2022 to freely access resources at multiple DOE user facilities through the FICUS research support …
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Supercharging SIP in the Fungal Hyphosphere
… helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a … and the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … HT-SIP is a capability available to request through  the JGI proposal calls . …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford … directed finishing and co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the … Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant …
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Fungal & Algal Program User Advisory Committee
… & Algal Program Advisory Committee is chartered by the Science Program Heads and report back to them. The Committee … and scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs’ management teams on how to …
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Expanding Virophage Diversity
… Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
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