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… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and in the laboratory. “We are fortunate because the progenitor species of  Brachypodium hybridum are … de Zaragoza, one of the paper’s senior authors. “It offers us the possibility to explore genomically the whole complex …

… Pictured from left: [Above] Hanin Alzubaidy, Markus Covert, Sheel C. Dodani, Kathryn Fixen, Jane Fudyma, … The JGI is a DOE Office of Science national scientific user facility supported by the Biological and Environmental …

… popularizer and communicator (and at one time, the spouse of Lynn Margulis). The information was then used to predict the metabolic strategies applied by a common … a longtime JGI collaborator, postdoctoral fellow Paula Matheus Carnevali was working with a group of …

… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) … scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … Program, and coordinates the development of the virus and plasmid workflows for the National Microbiome Data …

…   To understand virus-host dynamics, computation helps fill in what cultivation … to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …

… the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or … the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may help the pathogens … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office …

… (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture P­­lant Gene Expression Center, … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … its potential production of biomass on marginal lands not usable for conventional food crops. For that reason, its …

… time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding … wildlife habitats and water-quality regulation. Focusing on the rhizosphere and interactions between the trees, … for adaptation within the trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … a cold-adapted microalga: the diatom Fragilariopsis cylindrus . At that time, they noted that the F. cylindrus genome encoded more proteins requiring zinc than …

… single root cells and combining the information with previously published datasets. The work was  recently published in … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Career Research Program (ECRP) award, which is also focused on single-cell and spatial transcriptomics …

… species to grow better than its closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence Berkeley National Laboratory, aim … a way to map associations between genotype and phenotype using a strategy called reciprocal hemizygosity analysis via …

… With increased lignin and iron, engineered poplar can be used to develop bioproducts for industrial applications. For example, lignin could be used for building materials such as cement or adhesives. … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, and is supported by the Office of Science of …