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Draft Genome Sequence of Frankia sp. Strain CN3, an Atypical, Noninfective (Nod–) Ineffective (Fix–) Isolate from Coriaria nepalensis
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Virus Discoveries that Keep Getting Bigger
… work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in environments … large virions (700 nm in diameter) to much smaller virions (120 nm in diameter). Across the phylum  Nucleocytoviricota , … simultaneously, these genomic studies provide information about virus hosts. As a result, the outcomes of these …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE … fellow interns and scientists alike. Want to learn more about their experience? Watch the short video below. Video … fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna Watson: My mentor is Dr. Yi …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency declared the North … Dehalococcoides mccartyi and  Dehalobacter restrictus,  that work together to break down PCE into the chemical … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Accelerating Metagenomics Discoveries with Deep Learning
… workshop, Volkan Sevim, a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … is part of the JGI Genome R&D Group and is one of more than 100 scientists and systems engineers involved in …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have … to address long-standing evolutionary ecological hypotheses about how C4 perennial grasses like switchgrass respond to …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for fiscal year 2026, in … what each facility could generate individually. Learn more about the projects below. …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a … base pairs of sequence; by 2023, that number was almost 717 trillion. Last year, the JGI surpassed three Petabases of … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… with advanced computer skills. During the summer of 2016,  DOE CGSF recipient Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational Science Graduate Fellowship …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub … and around Earth outnumber the stars in the Milky Way, viruses outnumber the microbes by at least another order of … the microbes in and on humans shape our health. A total of 16 projects have been approved, divided among the following …
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Partnerships: Myco-Ed
… Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist observations … DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … analysis.  MycoCosm provides data and tools via a graphical user interface, ensuring that no programming knowledge or …
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MycoCosm Tutorial
… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes …
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