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JGI Mural
The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic JGI … the science depicted. The two-story JGI mural was commissioned for the JGI’s 25th anniversary and done by …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was … ASM Microbe Meeting in Los Angeles, Calif.  Roux is also one of the lead organizers of the Viral EcoGenomics & …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, … team has since identified  Dehalogenimonas etheniformans as one of the strains involved in breaking down PCE at the NRAP …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … weeks of tricky, laborious lab work to analyze samples from one experiment. Starting a  few years ago, researchers can … for researchers in this area. “Surprisingly, this was the first workshop of its kind on SIP metagenomics,” Malmstrom …
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Three Join the JGI User Executive Committee
… of the University of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go here to view the full roster of members. … in crops. He has been a PI or Co-PI on five user projects with the JGI, as well as served on review panels …
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Functional Characterization of Two Class II Diterpene Synthases Indicates Additional Specialized Diterpenoid Pathways in Maize (Zea mays)
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Giant Virus Infection Signatures Are Modulated by Euphotic Zone Depth Strata and Iron Regimes of the Subantarctic Southern Ocean
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. … Energy Efficiency and Renewable Energy under Agreements NL0032266. Funding for open access charge: …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place …
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The JGI announces 2024 awardees for our Community Science Program annual call
Tesfaye Mengiste, Egbert Schwartz, Hannah Schulman, Bram Stone and Jana Voriskovaa The JGI is excited to announce the … our 2024 Community Science Program Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals … annual CSP call is focused on large-scale genomic science projects relevant to the DOE’s Office of Biological and …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of … and Coniochaeata lignaria , and both DNA and RNA viruses. One trait that stood out in both bacteria and fungi … supported by the National Science Foundation (awards ACI-1532235 and ACI-1532236), the University of Colorado Boulder …
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Depth distributions of nitrite reductase (nirK) gene variants reveal spatial dynamics of thaumarchaeal ecotype populations in coastal Monterey Bay
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