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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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A Grass Model to Help Improve Giant Miscanthus
… multiple chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Building Wet and Dry Lab Skills
… by a DOE training grant.  Building off the previous year’s project, undergraduate interns Tamyra Long and Zyiah Mikes worked with mentors … project - they also worked with Sharon Greenblum from the User Support Analysis team to analyze plant microbiome data …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… common images in many regions due to more extreme weather events such as heat waves, droughts and floods. The … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of Biological and …
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PMR5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … through their diverse genomic capabilities. Summary In a project supported by the JGI Community Science Program, …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett … at one of the DOE national laboratories or national user facilities. Baker had worked with the JGI through a … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at …
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Georg Rath
… Mr. Rath has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working … from JGI’s science and production sequencing programs. …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from … The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … with >90% completeness. These results, noted JGI User Programs Deputy Susannah Tringe , suggest that extracting …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  … Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team … for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible …
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been elected … honor,” said Axel Visel , JGI Deputy for Science Programs. “It clearly speaks to the enormous impact her … to have scientists of Dr. Woyke’s caliber support the JGI User community in accessing our resources and help them to …
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