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Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach

Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics

Linking soil biology and chemistry in biological soil crust using isolate exometabolomics

Niche dimensions of a marine bacterium are identified using invasion studies in coastal seawater

High‐Density Single Nucleotide Polymorphism Linkage Maps of Lowland Switchgrass using Genotyping‐by‐Sequencing

Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs

Marker-free carotenoid-enriched rice generated through targeted gene insertion using CRISPR-Cas9

Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization

FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.

Multiplex knockout of trichome-regulating MYB duplicates in hybrid poplar using a single gRNA.

An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria

… researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team announced in … is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. “Piloting access to this …

JGI@25: Following Fungi that Pry Apart Plant Polymers

… 2022 marks the JGI’s 25th anniversary. Over the last year, … that would be produced by microorganisms — out,” said JGI user/collaborator Michelle O’Malley, a chemical and …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.