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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding … cycles, and possibly cold-temperature enzymes for biotechnological use. Summary Conditions such as extreme … a haloarchaea “pan-genome.” Described as the total pool of genetic material comprised by all members of a species, the …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete … the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most … it’s difficult to link the connections to them from the genetic elements that scientists have found, e.g. plasmids …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role … Together, these teams provide analysis support and R&D for production and user science. He received his Ph.D. from … University in 2005, where he studied RNA editing and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, …
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The Structure of CcmP, a Tandem Bacterial Microcompartment Domain Protein from the β-Carboxysome, Forms a Subcompartment Within a Microcompartment
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Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and around Earth … CODCC aims to coordinate data acquisition, analysis, and visualization through a sustainable, state-of-the-art data … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome … of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group … in natural ecosystems, and functionally explore viral genetic diversity.  In 2021, he was among those selected by …
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Type IV Pili‐Associated Secretion of a Biofilm Matrix Protein From Clostridium perfringens That Forms Intermolecular Isopeptide Bonds
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & … is wild,” and admitting, “friends give me a hard time for that.” But the title brought him back to his first … just a collection of some of the folks, who’ve been pushing forward these techniques and, and making all kinds of super …
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