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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led … AB in Physics, Princeton University, NJ MS in Theoretical Physics, Cornell University, NY PhD in … Publications … Award, National Cotton Council 2009 Friday Evening Lecturer, Marine Biological Laboratory 2000 John Simon …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place … play key roles in global carbon cycling, are sources of natural products, and have potential as biofuel feedstocks. …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our … challenges.   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve spent millions … four strains of anaerobic fungi also, unexpectedly, secrete natural products . Those results showed that these fungi may …
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Effects of Polar Light Cycle on Microbial Food Web
… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it comes to … and offers new clues into a unique environment in the natural world. The Impact From the polar regions to the deep … 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and Biotechnology, University of Crete, … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The … lab in collaboration with the JGI), human microbiomes, natural oil seeps in Santa Barbara, Calif., and soil from … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful platform … still able to reproduce asexually through mitosis. The alga naturally produces high amounts of oil and can grow with or … supported for his work on  Auxenochlorella genome sequencing and assembly in Berkeley, in part, through the …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at the UC Merced School of Natural Sciences. “I’m deeply concerned about climate change … a remarkable opportunity to launch a pilot project and begin the work of understanding how engineered environments …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of Energy (DOE) … to energy and the environment.” she says. “So, it’s quite a natural fit and a nice complement to the contributions from …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more extreme … University of California (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture …
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