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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and … two main branches of fungi); another is a photosynthetic microbe, tucked in the fungus’ tissue. If you’re a Marvel … (IGSP 2008001) to DA, FL, and FD from the Duke Institute of Genomic Sciences and Policy (for DNA sequencing and …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … P. vulgaris on Phytozome … Plant Datasets …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … our long term efforts to contribute towards a diverse workforce and scientific community (working with the JGI) as …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome Carlos Vazquez and mentor Bryce Foster, …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … on the genetic mechanisms of chemotaxis in the Arabidopsis microbiome, particularly, how bacteria can be driven toward …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the … for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … resources theme. Evolving and growing the JGI workforce and culture simultaneously with the scientific and …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His research activity … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, … following his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and custom …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the … Dr. Cole’s research focus has been on understanding how microbes can colonize plant roots, focusing on genetic components required for effective colonization. In addition, Dr. Cole is …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for …
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Igor Grigoriev
… Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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