Search

… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …

… from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … years, extracting single cells and then amplifying their DNA for genome sequencing was no easy task. The traditional … Amplification to generate enough DNA to put on a sequencer. As previously mentioned, it’s a method that’s …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a … team to associate climate adaptations with switchgrass biology. Switchgrass has a large polyploid genome, which …

… deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural …

… the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … integrative biology. Researchers who are applying genomic sequence information to BER-funded activities of plant …

… By studying the structure and function of a cyanobacterial protein, researchers have new insights … to the protein parts of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach known as DNA stable isotope probing (DNA SIP) relies on incubating …

… technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … program for higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological Curriculum for Education and Discovery is a microbiology program that provides training and scientific …

… environmental challenges. Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …

… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen … the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, … developments at the JGI and KBase toward integrative biology and hear from researchers who are applying genomic …

… Over 40 percent of the cereal crop’s genes respond to drought stress. The … conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be … certain diseases are well known to be partially due to the DNA sequence that makes up an individual’s genome. The genes …