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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and organisms than … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational … AB in Physics, Princeton University, NJ MS in Theoretical Physics, Cornell University, NY PhD in Physics, Cornell … Publications … 2018 Marthella Foskett Brown Chair, Computational Biology, UC …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative … impact on the microbial communities within soil. Using metagenomics, scientists can shed light on hidden … This work was supported by the Department of Energy (DOE) Office of …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and … of viruses in the same drop—the vast majority not harmful to humans could be even larger. Viruses infect bacteria, … been co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the … (“contigs”) from thousands of ecologically diverse metagenomics samples. The work is supported by NIH Common … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of … Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … that showcase our collaborations and capabilities to enable great science that will help solve energy and … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick to learn more about the offerings and capabilities we offer …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their biosynthetic logics to be …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, creating opportunities for … its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from …
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