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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical … Grigoriev is the Fungal & Algal Science Program Head at the JGI. Click to learn more about the program's areas of focus, major … Selection of Industrial Organisms, Moscow, Russia Postdoctoral training in computational structural genomics, …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi … common.  To complete this analysis, a multi-institutional team of researchers collected soil samples from a wildfire … Sciences Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). EMSL and the JGI are DOE …
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Mapping Heat Resistance in Yeasts
… diversity in traits relevant to U.S. Department of Energy (DOE) missions in energy and environment. Summary There are … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … data. Reported October 8, 2018, in Nature Genetics , a team led by researchers at the University of California, …
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2024 Progress Report
… Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … April 2024 — through serving an increased number of users with a record output of products, making data easier to … number of primary users — 2,456 — had active proposals with us, along with more than 15,000 secondary users who …
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Overview of the Genomes OnLine Database (GOLD)
… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a … genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature Microbiology an important … be engineered. “Piloting access to this emerging technology with JGI users will enable us to assess CRAGE’s impact, …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad … and its curation in our core processes. This allows us to provide diverse scientific communities with large amounts of standardized high-quality data and … Looking for BBTools? Find it here.  …
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The ancient Salicoid genome duplication event: A platform for reconstruction of de Novo gene evolution in Populus trichocarpa
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An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies
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The Surprising Structure of a Shrub Willow Sex Chromosome
… , employ the evolutionary strategy we are far more familiar with: differentiating into male and female sexes. For the … feedstocks of interest to the U.S. Department of Energy (DOE). (Poplar is a Flagship Plant.) To engineer them, … Virginia University (WVU), led the study’s international team, which included scientists from Oak Ridge National …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New … Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the …
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