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… 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for … among sympatric soil bacteria. Nature communications, 6(1), 8289. Yao, Y., Sun, T., Wang, T., Ruebel, O., Northen, … Rubel, O., Prabhat, Mahoney, M., & Bowen, B. (2015). Identifying important ions and positions in mass spectrometry …

… and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All SAR324 have very closely related …

… Research Council (grant numbers DP140102552, DP110101621), and an Australian Government Research Training Program …

… analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists … to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and … genomic data (MAGI) for functional annotation and identifying unknown compounds (Pactolus). …

… Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   … Achievement 2009 LBNL Outstanding Performance Award 2006 AHA Lievre Fellowship Award, 2000 Boehringer Ingelheim … pathogenic rewiring of gene-enhancer interactions. Cell 161, 1012-25 Ivanova NN, Schwientek P, Tripp HJ, Rinke C, …

… that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer … and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, FL, and FD (for bioinformatics) from … and by a DOE-Biological Environmental Research grant No FWP 61327 to FRC and PL (for RNAseq). The work at the Joint …

… services and analysis—to participants. Over the past two years, Myco-Ed has been used in 15 individual classrooms across the country, training 316 students in fungal biology, bioinformatics, and genomics.  … and data analysis. Starting with isolating and identifying fungi in the environment, students can prepare samples …

… Baldrian’s team was investigating. So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) … referencing the database, Baldrian’s team was able to identify enzymes in the soil and who made them. Based on data … work was supported by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth and …

… on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both … fragments. Additionally, CheckV was able to identify just over 17,000 contiguous sequences (contigs) of … This work was also supported the grant #2016/23218-0 from São Paulo Research Foundation (FAPESP). …

… filter the data for the major capsid protein (MCP) to identify NCLDV viruses. JGI researchers previously applied this …

… isotopes to measure carbon and nutrient flux, and identify microbes assimilating labeled compounds. During this … We do a hydrolyzation of the DNA and we look and quantify the isotopomers. We estimate the overall atom enrichment … measure the 15N at the bulk level, if that helps at all.  6. Q:How would field applications of the rhizoboxes …