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… are subject to a  two-year embargo starting at construct or strain delivery.  Detailed sequence information and constructs are made publicly …

… enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … DAN UDWARY: That’s weird. I hadn’t heard that before. Why is that? Why would that be the case? ALISON NARAYAN: …

… For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …

… To meet these needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell … same time, the team is expanding current capabilities in strain engineering and functional assays and supporting new …

… Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … perspective, JGI has a large database of biosynthetic gene clusters and biosynthetic gene cluster fragments, and all … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …

… through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot alkaloids come from … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …

… We focus our efforts on integrating database mining and sequence design with scaling the production of large, … synthesize constructs such as those involving biosynthetic clusters, or high complexity combinatorial libraries.  We … developing methods for converting digital information from sequence databases into biotechnological or environmental …

… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … see that SAR324 was made up of four ecologically distinct clusters, or ecotypes. These ecotypes fall into two main …

… global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics … MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes. …

… algae, examining both natural populations and engineered strains. This approach allows for the identification of key … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …

… is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which … T ., Klenk H. P., Kyrpides N. C. 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree …