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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Institute, or JGI. JGI is a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. … stories about natural products, so you can get a feel for why I think they’re so important, and we’ll start to explain …
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RNA-Seq Reveals that Light and Darkness Are Different Stimuli in Freshwater Heterotrophic Actinobacteria
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, … published. The JGI expects that the data produced by the facility result in scientific publications. JGI users and … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other …
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Biodesign
… Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing … Check out our organism-agnostic CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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DNA Synthesis Program
… a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … collaboration with U.S. and international scientists to drive innovations that align with DOE's missions. … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … you maybe explain what’s going on with their biology and why they’re so important to natural products? ERIC:  Sure. … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …
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Natural Prodcast Episode 23: Aaron Puri
… now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … your interest in getting into natural products. DAN: Why are you here at SIMB? AARON PURI: Yeah. Thanks Jackie. …
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Genome Sequences of Actinobacteria from Extreme Environments in Colombia
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Frequently Asked Questions: Project Management
… https://signon.jgi.doe.gov . This account can then be used to submit proposals, sample and project metadata, and to access JGI tools and systems. … Go to the “ edit contacts ” page in your account. Use the form to update all information except email address. To update …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …
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Genome-Based Taxonomic Classification of the Phylum Actinobacteria
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … and assembly group: Our production group operates as user facility that aims to provide access to state-of-the-art DNA … We focus our efforts on integrating database mining and sequence design with scaling the production of large, …
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