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Mission
… in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … basis of their behavior in the environment.  The JGI genome sequences and metabolomes of microbes and microbial … energy and environmental mission objectives. Fungi, algae, bacteria, archaea, viruses, and microbial communities of …
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Microbiome Data Science Team
Nature Microbiology 2018), discovery of new genes with important biotechnological applications (e.g., new … and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …
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Partnerships: Adopt-A-Genome
… in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of … metadata to enable comprehensive comparative analysis. Importantly, IMG/M provides data and tools via a graphical … sequence to biological inference. … Genome sequences of key bacterial symbionts of entomopathogenic nematodes: …
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Natural Prodcast Episode 14: Nigel Mouncey
NIGEL MOUNCEY: It really does. These molecules are playing important roles in the environment. These organisms wouldn’t … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We … An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria Check out the agenda for the JGI’s 2021 Annual …
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Strain Engineering
… years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no …
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Special Initiatives & Programs
… capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … and personnel resources for genomic research and sequence-based science.  Projects include de novo generation …
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Genome Insider
… in plants, fungi, microalgae, environmental viruses, and bacteria to contribute to a more sustainable world. Learn …
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Data Policy
… embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( Actinomycetota ), a group of bacteria with … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … nomenclatural and genomic information as well as of important descriptive metadata about each strain. “This has …
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Publication Policy
… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi … So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences … soil samples. This gene expression dataset was particularly important for characterizing fungal genes, because, unlike …
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Natural Prodcast Episode 20: Brian Bachmann
And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, … in the marine ecosystems and marine actinomycetes and cyanobacteria. And we thought we could also– let’s see what caves …
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