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Natural Prodcast Episode 5: Brad Moore
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …
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Natural Prodcast Episode 18: A CSP Primer
… DAN UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. … with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. …
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User Advisory Committees
… the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and seek to establish … providing input and advice on JGI policies and practices that affect users and their science including technical …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since I’m … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence …
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Institutional User Agreements
… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … the legal authority to commit your institution or organization to the terms and conditions in the User Agreement. …
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Natural Prodcast Episode 16: Marcy Balunas
… in firmly in the chemistry bucket. [LAUGHS] I don’t know that that’s ever necessarily like a good description of anyone … so there are– I hesitate to make a guess but maybe 50 to 100 different strains and they are in individual tubules.  … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t …
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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the … to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …
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Frequently Asked Questions: Proposal Submission
… You can review successful letters of intent and submissions at the bottom of the page.  … are done using web-based forms.   To view the proposal templates, go to the proposal submission page , login using your JGI account (create one here if you don’t already have an …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities … Starting a  few years ago, researchers can request quantitative SIP analysis as a capability in proposal calls … easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host …
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