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… metabolism, and natural products, or metabolites, were basically interchangeable terms in terms of common usage. And I … by bacterial or fungal metabolism by microbes, will have a functional role. We started from that. Evolution doesn’t … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff …

… analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …

… by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … of mine from the company that we used to work at together called Warp Drive Bio, which was a genome mining company. So … the DNA that was breaking the sequencing from really being functional was these secondary metabolite pathways. So why …

… the quality of single-cell genomes and directly link functional information with individual cells. Research Team  … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … measure environmental microbiome activity levels.This functional assay lets us move beyond cataloging the genes of …

… in data analysis and secondary metabolism over the last decade or so. He’s involved with a lot of the common tools … a bad location for a little baby. Rooming in, is what they call it, right? Alison Takemura: Yeah. Crashing. Maybe it’s … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …

… international meeting on natural products, but as a new, I call it “incarnation”, for this series of meetings. It’s … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … compound that people know, as a family, it’s more than 7 decades. So, this family of substances is always associated …

The JGI Engagement Webinar held November 5, 2020 (watch the  video below, … available through the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of … do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up …

… on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining company, … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really … ATP synthase.” On everninomicin biosynthesis: “EvdS6 is a bifunctional decarboxylase from the everninomicin gene …

… said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … transformations.” The JGI’s large-scale call included algal genomics as a focus area, and one of the accepted proposals … toward generating “with unprecedented precision” the gene functional networks and regulatory networks of a single …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel …

… a snapshot of microbial diversity and their metabolic functional potential. This research enables us to better … resources that support user analysis of biogeochemically-relevant pathways, enabling modeling of microbiomes … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …