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… JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions … among members that catalyze data flows and promote novel data applications. As a large-scale data generator, … Our metabolomics platform delivers rich metabolite profiles from diverse biological and environmental samples by using …

… the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw … and quality of finished product depend on genome. Selected genomes will be improved based on feasibility and scientific … Fungal Resequencing SNP and short indel calls, rearrangement detection, population analysis Text file of SNPs …

… the trust of our stakeholders. These stakeholders range from scientists to members of the public whose tax dollars … The JGI Leadership Team : Nigel Mouncey, JGI Director Massie Ballon, Communications & Outreach Manager Tina …

… conversation with Aaron Puri. He is an Assistant Professor from the Chemistry department at the University of Utah, so … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … to identify what’s being made. In some cases it might be novel, in some cases it might be– might be a known structure …

… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … in cooperation to support a forest, and species vary across Earth’s ecosystems.  Recently, in work  published in  New … 1000 Fungal Genomes Project on Mycocosm …

… focused on the fundamental science of animal and insect microbiomes, or on plant pathogens not associated with … of scope, as are marine-focused projects (more than 185 km from land). …

… interactions with their environments and with each other, from defending against predators to aiding in symbiotic … broader goal of enhancing biotechnological applications, from biofuel production to improving the resilience and … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

… Using a novel computational approach, researchers confirm microbial … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … data from the JGI’s  Genomes from Earth’s Microbiome , or GEM catalog). Then they removed any genes with even a remote …

… Laboratory. Being a User Facility means that scientists from all over the world bring us big problems related to … so it’s some kind of – Is it a compound that helps them from drying out? Or… What is it? DAN:  Yeah I don’t know! … of a problem. And so there was a major effort to try to figure out ways to get around this. Often when you can’t …

… Uncovering associations between plant roots and fungi that … plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … Sciences (CEPLAS), both funded by the Deutsche Forschungsgemeinschaft. F.M. salary was covered by the DECRyPT 2125 …

… years, fungi have spread quietly throughout our planet. From the deepest ocean floors to Antarctic valleys, these … one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … Moving toward 10,000 fungal genomes and beyond will yield novel enzymes and metabolites, enable prediction of fungal …