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Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01
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Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps
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The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … advance our understanding of Earth’s ecosystems. … The Metagenome Program focuses on the high-throughput sequencing …
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High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence
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What Happens To a Rainforest When You Dial Up Drought?
… happens to that storage when a rainforest hits a drought. Tag along with their experiments in a fully enclosed, human-made ecosystem: Biosphere 2.      …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … plant pathogen species, Phytophtora sojae, which imperils soybean harvests. The subsequent comparative analysis of … the SODmap Mobile app enabled SOD Blitz participants to geotag specimens they collect. Later, those are annotated with …
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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Natural Prodcast Episode 10: A Primer on Genome Mining
… found in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …
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Tapping the treasure trove of atypical phages
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Protocols
Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted from 70 full … interested in learning more about the fungal endophytes of soybean and how they deter two significant pathogens, the soybean cyst nematode and the soybean sudden death pathogen. …
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