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Natural Prodcast Episode 9: Roger Linington
… the idea that you could go internationally to do the next stage of your training and that there might be more to be … how best to begin. And so in the end, we did it in several stages. So we started out internally by making a list on the … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to …
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Natural Prodcast Episode 7: Ben Shen
… our first six episodes, and now after gathering some feedback and making a few technical tweaks, I think we’ll be … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … enediynes to the market in 2001 with a drug called Mylotag. Wyeth was later acquired by Pfizer in 2009. So, a …
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Secondary Metabolites Program
… not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often …
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What Happens To a Rainforest When You Dial Up Drought?
… happens to that storage when a rainforest hits a drought. Tag along with their experiments in a fully enclosed, …
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Natural Prodcast Episode 15: Katherine Duncan
… exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products … structure information. You still need structure at this stage, and you still need to put that information into … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N …
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Finding the Fermenters
… from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on the list. They also searched IMG/M for all protein-coding genes belonging to each genome. … also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the …
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I-Min (Amy) Chen
… infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in 2006, she was … et al. IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata. Nucleic acids … K, and Chu K. Maintaining a Microbial Genome & Metagenome Data Analysis System in an Academic Setting, SSDBM …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… the major high-yield C4 crops, as are the candidate biofuel feedstocks Miscanthus and switchgrass.  Innumerable road … “A big part of the Danforth Center’s mission is to feed the hungry and improve human health. So there’s a major …
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Natural Prodcast Episode 18: A CSP Primer
… a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So … is over, the data gets released on our portals, such as IMGM. But we also then push the data to GenBank. So the raw …
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Protocols
Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …
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Ken Chu
… of analytical tools and user interface components for the IMG family of systems. …
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