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Diversity and evolution of nitric oxide reduction in bacteria and archaea.
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Natural Prodcast Episode 10: A Primer on Genome Mining
… in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed … The GEM catalog expands the bacterial and archaeal orders as seen on the phylogenetic tree, with new … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; …
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Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains
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Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes
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Ammonia‐oxidising archaea living at low pH: Insights from comparative genomics
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Aerobic bacteria and archaea tend to have larger and more versatile genomes
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Dynamics and activity of an ammonia-oxidizing archaea bloom in South San Francisco Bay
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Propagation of viral genomes by replicating ammonia-oxidising archaea during soil nitrification
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JGI Workshops at PAG
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity … “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their diversity we've … quality scores representing potential genomes, and nearly 44,000 metagenomes. All of the data are publicly available …
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