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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … A primary purpose of this project is to bring educators from a broad range …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules … fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy and nutrient … The Metabolomics Program is focused on understanding the critical roles …
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Natural Prodcast Episode 19: Bill Fenical
… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … everybody else started looking at things and doing chemical structures, learning a little bit about things. And that was … molecules that bound inside the cells to tubulin, these proteins that allow the cells to divide. We found all sorts …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … predicted functional and metabolic roles across global metagenomes (within IMG).  The Impact The initial analysis …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Everything that we’re finding seems to be a new structure, and the microorganisms are novel. I mean, we have … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence … BGCs but highly fragmented, in most of the metagenome sequences that we’ve already analyzed. But that’s a whole …
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JGI@25: From Life at the Extremes to Editing Genomes
… one in 2018 on the discovery of miniature CRISPR-associated proteins that can target single-stranded DNA. Such proteins … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her … doi: 10.1038/s41467-017-01408-4. Tyson GW et al. Community structure and metabolism through reconstruction of microbial …
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering … National Laboratory (BNL) led a team that  identified a protein , PtrbHLH011, within poplar involved in plant … were conducted to study iron accumulation and cell wall structure in the poplar plants with help from scientists at …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … Please review our FAQ in advance of contacting the PMO office.  … Before work can start on any approved proposal – including the … PMO: Frequently Asked Questions …
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Uncovering Sequence and Structural Characteristics of Fungal Expansin‐Related Proteins With Potential to Drive Substrate Targeting
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Natural Prodcast Episode 15: Katherine Duncan
… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk … of natural products from invertebrates, mostly. Dan Udwary: Structure elucidation, yeah. Kate Duncan: Right, yeah, so … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the …
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Structural Determinants Underlying Photoprotection in the Photoactive Orange Carotenoid Protein of Cyanobacteria
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a … to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data portals. …
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