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FICUS Overview
… for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily integrate … and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is … provides customized analysis, the JGI also participates in publication of results. …
Learn more
Natural Prodcast Episode 16: Marcy Balunas
… in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … chemistry that deals with reactive oxygen species and so potentially could go down that route.  DAN: So the sun …
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Micro-Scale Applications Group
… Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes …
Learn more
Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … and enabling technology, but interesting biology and a potential application of translation in medicine. So it’s a … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, and you’re … term you prefer. In this episode we’re going to finish up by talking about the modern, post-golden age history of …
Learn more
Frequently Asked Questions: Proposal Submission
… successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, … Many of the submissions are done using web-based forms.   To view the proposal templates, go to the proposal …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the … lending their expertise in developing and managing public viral genomics resources such as analytical tools and data … analytics for uncovering virus dynamics and functional potential ," is among the five focused on tool development. …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With …
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Natural Prodcast Episode 18: A CSP Primer
… If you stick around for the next few months, you’re going to hear my last interview with my co-host Alison Takemura, … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … CPI. MENAKA WILHELM: Is there anything else that you want potential users to know? TANJA WOYKE: Yeah. I think one …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … that example, was it the case where that colleague saw a potential mechanism for why there would be this … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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A Natural Mechanism Can Turbocharge Viral Evolution
… how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first … uncover these DGRs. DGRs were found in single microbial and viral genomes, as well as genomes sampled all at once from … genomes. That means that those viruses accessed many more potential microbial cells or hosts. This ability isn’t …
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