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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … First and foremost, our interview this week is with Professor Brian Bachmann from Vanderbilt University’s … notes, which you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … core science programs which are microbes, and fungi, and algae plants, synthetic biology. And so we have, I think, … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … get, which is already a fairly small number. We’re a very niche podcast. And so maybe if we can combine two things … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Synthesis
… automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables … CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, … … Plus: SynTrack and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … be doing work in this field. So yeah, I thought we’d go through some of some of the background of the science and a … fungus to trees and doing things that are useful to us or harmful to us and understanding all of that I think is what …
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating these … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing … ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … mark, these algae showed significant signs of recovery through increased nutrient uptake and decreased cell death.  …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … about natural products and the science and scientists of secondary metabolism. Hey there, and welcome back to … started during my PhD. And then I actually found out, through a connection of my supervisor, that in parallel, …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. The … was generally thought to develop clonally. Yet its genome revealed that the alga has all the genes needed for meiosis, …
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Green Algae Reveal One mRNA Encodes Many Proteins
… a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers … on a single molecule of mRNA – in two species of green algae, Chlamydomonas reinhardtii and Chromochloris … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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