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Community Science Program
PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic … the JGI makes the assemblies, gene annotations, and analyses available to the community at large. In most cases … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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JGI Portals
… fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome … genomes, and to conduct comparative and genome-centric analyses of fungi and community annotation. … Phycocosm is a … descendants of ancestral genes are constructed at key phylogenetic nodes. These families allow easy access to …
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Natural Prodcast Episode 12: Nadine Ziemert
… of it. So it wasn’t only chemistry or only biochemistry or genetics. It was also ecology. It was also evolution. It was … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … with animal metabolism itself, and it’s really amazing what diversity there is in animals. I think, even despite the … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute … and JGI staff with respect and consideration, valuing a diversity of views and opinions; Exercise tolerance for … Fagnan, Chief Informatics Officer Len Pennacchio, Deputy of Genomic Technologies Axel Visel, Deputy for Science Programs …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as different types … instrumentation we use and our methodology for metabolite analyses.  … Read more about our submission guidelines, what …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, …
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FICUS-NERSC/KBASE
… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … the JGI makes the assemblies, gene annotations, and analyses available to the community at large. In most cases … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … Very familiar with working actinomycetes. We can also genetically manipulate them. We can do strain improvements. … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …
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