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Products
… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in … separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial aggregate, or a … Plant, Algal, Fungal, and Microbial DAP-seq Used for genome-wide identification of transcription factor binding sites. …
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Mission
… and professional expertise to support the global research community in studies of complex biological and environmental … as a national user facility, and has grown to serve a worldwide community of more than 2,000 primary users—those who … are at the core of many environmental processes, and the genetic makeup of microbial species and communities forms …
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Secondary Metabolites Program
… conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being expressed. The program works to … and debate about the data. It is also a place where the community can upload new data for use by scientists and the … as an important line of communication to the scientific community. In each episode, hear from luminaries in the …
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Plant-Microbial Interactions Group
… single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … strains, whereby they can modulate host metabolism, gene expression and phenotype. We have recently identified … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Natural Prodcast Episode 6: Marc Chevrette
… that can’t live without their host. They have no extra genes hanging around, they still dedicate 20-30% of their … a course. So this is taught at over 270 places now worldwide with a rate of around 10,000 students a year. And that … Currie’s metagenomics research, enabled in part by JGI’s Community Science Program.] So that’s one example where we …
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Homepage
…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  …
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Fungal & Algal Program
… on large-scale sequencing efforts that survey the vast phylogenetic and ecological diversity of fungi and algae, … comparative and genome-centric analyses of fungi and community annotation. … Phycocosm is a comprehensive … genome-centric analyses of algae, while also encouraging community engagement and data exchange. … Mycocosm … …
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Partnerships Development Team
… three primary routes:  … The CSP provides the scientific community at large with access to high-throughput sequencing … right, title, and interest to any intellectual property generated under the agreement. … CRADAs enable research … visit the Intellectual Property Office  here . … The Community Science Program … Strategic Partnership Projects … …
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Institutional User Agreements
… rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Natural Prodcast Episode 7: Ben Shen
… technology to help access complicated natural product gene clusters, and we’re all really excited about that, and … not only I say we were able to make use of it, but also the community can benefit from the technology. But even better, … technology available to the broad – the common scientific community. And that also goes true for the strains. And most …
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User Executive Committee Charter
JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice … user meeting. The UEC also acts as a liaison to the user community and the broader scientific community and promotes communication and collaboration …
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Natural Prodcast Episode 5: Brad Moore
… genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … and Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they worked with us to … There’s always been a big mystery in the oceanic community about these organisms. They’re not always toxic. …
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