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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy … and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of … algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being expressed. The program works to …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of … I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … It was unpublished at that point. But people would push out gene clusters maybe once a month at most. Maybe twice a …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … field of natural products is undergoing a really exciting Renaissance, as tools and opportunities in other research …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to … and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily …
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The fate of 35S rRNA genes in the allotetraploid grass Brachypodium hybridum
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Natural Prodcast Episode 18: A CSP Primer
… … DAN UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for the … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint … and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial … help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial …
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