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Partnerships: Adopt-A-Genome
… work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … by the Department of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In … was tested on a number of plants, including  genomes of cotton lineages and the  oilseed crop false flax – genomes …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven … outside of the area of focus of most of the rest of the group, which made it feel like I had something tangible to …
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Natural Prodcast Episode 17: Cassandra Quave
… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … love and care. Yeah, and let’s see. I lead a research group at Emory, I teach classes here on food and health and …
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Dan Rokhsar
… directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program … Brown Chair, Computational Biology, UC Berkeley 2012 Cotton Biotechnology Award, National Cotton Council 2009 …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect industry to … works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT … of Energy announced the  2020 TCF projects . One of them supports a project between JGI and LanzaTech, a Skokie, …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … polysaccharides. Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production … (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe … Metabolites Science Program here at JGI. It’s a new group formed under the director who has also got a long …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … episodes, but it’s not terrible. I was able to clean it up quite a bit, and the conversation was so interesting that … by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a …
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Jeremy Schmutz
… human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … T., Lovell, J. T.., et al. 2023. JGI plant gene atlas: an updateable transcriptome resource to improve functional gene … of five Gossypium allopolyploid species and their impact on cotton improvement. Nature Genetics 52: 525-533. Lovell, JT …
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … BER also provides us guidance on what kinds of research to support and conduct. I already told you what a CSP is, but … info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can …
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