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… to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … The SMC provides complete sequence and annotation data for secondary metabolite biosynthetic gene clusters (BGCs) …

… in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial … RiPPs. That sort of holds up with what we have seen in the past with people that have done metagenomic studies on, say, …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …

And as a result, there’s been a lot of work on open pond systems and infrastructure and growing microalgae. And to … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …

… the design and synthesis of complex genetic pathways and biosystems. It The program fosters collaboration with U.S. and … decomposition, CO2 fixation, redox reactions, and plant metabolite biosynthesis, synthesizing and … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …

User Facility located at Berkeley Laboratory, built off past experience in developing a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as … BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently underway. … …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and their …

… the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating … away from the ocean. Microbes. We’ve done those in the past, but the DOE mission changes over time. Yeah. We don’t …

… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … Yeah. Yeah. One of the things that I have observed in the past is that it seems like a lot of natural products are … DAN: Almost like you know that there is. AARON PURI: It’s a planted question Dan. Yeah. So overall I think what we’re …

… our HERE (TK) , used successfully by investigators in the past.  These protocols are not endorsed by and have not been … for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) … Policy & Support page.  … Please review our Webinars and Events pages for details.  … Who is my project manager? … …

… performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological … these missions, and to expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural … ag[riculture] and I really liked – I became interested in plant disease in part because of what happened in my Peace … challenges were associated with getting good transformation systems going. That has a lot to do with, well, the fact …