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CSP New Investigator Call
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Natural Prodcast Episode 20: Brian Bachmann
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — but not …
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DNA Synthesis Program
… in synthetic biology engineering workflows. … The IMG/M system serves as a community resource for comparative … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and genome-centric …
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Mission
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CSP Large Scale Call
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I-Min (Amy) Chen
… data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in 2006, she was … et al. IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, …
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Natural Prodcast Episode 6: Marc Chevrette
… the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence … Wisconsin, and we try and use them to fuel a drug discovery pipeline. So that’s two prongs and one of those prongs is … So 10,000. We have many more isolates right now than we’ve processed. So it’s an exercise of going back to the fridge …
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Natural Prodcast Episode 15: Katherine Duncan
… there have been huge advances in both. The cool thing about genomes is you can, well, if your assembly is good, you can … can all recognize that, in terms of diversity, in terms of inclusion, there’s certain countries that are always …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature … we identify evolutionary signals that if they are properly processed with the right algorithm, in this case EvoMining, we might be able to find any new genomes, new areas or regions or loci, that encode for new, …
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Refining the Process of Identifying Algae Biotechnology Candidates
… strain, identified through a screening and characterization pipeline. The Impact Part of the Department of Energy’s work … Labs to screen, characterize, sequence and then analyze the genomes and multi-omics datasets for algae that can be used … from algae. The collaborative approach highlights how the pipeline could help researchers accelerate efforts to …
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Genome Insider
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