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… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … has gone on, the more we’ve become interested in sort of systems level approaches. So rather than asking one question … we’d done by hand, in order to build a machine learning model that would look at all of the data that’s in PubMed, …

… Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … research data and analysis products (referred to as “data” for the remainder of this policy) produced through all user … Program (CSP), Facilities Integrating Collaborations for User Science (FICUS) initiative, Director’s Science …

… and the bacteria and how the chemistry is going back and forth between them is part of what fascinates me about what … think might be happening, we’re sort of converging on this model of this being called an egg defense model. And so … to that and what you guys do when you’re exploring your systems. Because I think the JGI has a little bit of a …

… bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … the design and synthesis of complex genetic pathways and biosystems. It The program fosters collaboration with U.S. and … functional genomics, focusing on developing genetic systems that can address global energy and environmental …

… actual molecules present in an environment that influence system behavior.  Through this identification, metabolomics … of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the … of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse …

… metabolites and associated genes are great resources for bioremediation, new agricultural applications or … through the OGG. For a long time, C-fern has served as a model for studying ferns and for teaching plant biology. It … paving the way for C-fern to expand its role as a key plant system for teaching next-generation plant biology. …

… analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … The research efforts of the group have concentrated in demonstrating the … with a special focus on microbiome research.  These efforts include exploration of the global diversity of …

… the structure and function of a methylthio-alkane reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial … genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose of the program … insights from sequence data, employing IMG data and tools for comparative analysis, visualization and interpretation …