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… DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 …

… projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring … agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and phytoplankton … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …

… are open to both domestic and international applicants from any institution type and at any career stage. … users are able to work with Berkeley Lab.  However, users from certain countries (Iran, North Korea, Cuba, and Syria), need DOE permission and authorization from other U.S. government agencies to work with Berkeley …

… information into actionable insights and solutions. Genome-enabled biology provides solutions to strengthen … focused on the fundamental science of animal and insect microbiomes, or on plant pathogens not associated with … of scope, as are marine-focused projects (more than 185 km from land). …

… A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to …

… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … talk about genome mining using the GEM catalog in  this episode of the JGI  Natural Prodcast . Using this massive … BGCs in IMG/ABC (Atlas of Biosynthetic Gene Clusters) by 31%. ( Listen to this JGI Natural Prodcast episode on genome …

… profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …

… to better understand the plant-associated terrestrial world. Research Team    … Plant microbiomes hold the amazing ability to influence plant … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 …

… interactions with their environments and with each other, from defending against predators to aiding in symbiotic … broader goal of enhancing biotechnological applications, from biofuel production to improving the resilience and … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric … through analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial …

… JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions … Our metabolomics platform delivers rich metabolite profiles from diverse biological and environmental samples by using … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …