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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and … single cell approaches. This includes linking strain-level genetic variation to ecological niche adaptations.  Single …
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Extensive Genetic Diversity is Present within North American Switchgrass Germplasm
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for a couple … A few examples of those are obviously expanding the diversity of known secondary metabolites and their …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … for key plant species, enhancing our understanding of plant diversity and integrating various data types to explore the …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is … them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … discussions on how to capture and characterize viral diversity, understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity.  In 2021, he was among those selected by …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … derivatives of natural products.  ALISON: Like such a large diversity can have similar effects, I think is also really … puppet of a Yeti with a large purple lollipop attached to its mouth. We’ll have to put a picture of this on the …
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CalTeach
CalTeach is a program for undergraduate majors interested in developing a deep understanding of STEM teaching & … focuses on STEM pedagogy, educational theory and promoting diversity, equity, and inclusion, with concurrent …
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Strain Engineering
The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no genetic tools enabling heterologous expression and …
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Frequently Asked Questions: Proposal Submission
… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review … sequencing project. … Utilization or transfer of any genetic resource may be covered by local, national or … activity. A few examples include: Convention on Biological Diversity Nagoya Protocol on Access and Benefit Sharing …
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Functional Diversity of Diterpene Synthases in the Biofuel Crop Switchgrass
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Uncovering Novel Genomes from Earth’s Microbiomes
… for multiple applications.       Despite advances in sequencing technologies and computational methods in the … genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be cultivated under … Biotechnology . Known as the GEM (Genomes from Earth’s Microbiomes) catalog, this work results from a collaboration …
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