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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | … Borevitz) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … so I’m hoping we can follow up with him again as the project progresses! If you’re interested in RiPPs, I’ll put …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of … terpene synthase gene family across eucalypt lineages. The Science From the distinct smell of eucalyptus to the flavor of wine, terpenes are ubiquitous. A … data carried out by EMBRAPA as part of the  Corymbia  genome project was supported by FAPDF grant “Nextree” …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … links below. Naturalist Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National … Berkeley, California.  Our location at the IGB fosters team science and collaboration with partner organizations such as … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …
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Genome Insider
… The Genome Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host … researchers — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes …
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Natural Prodcast Episode 17: Cassandra Quave
… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … find me. And really it was my third grade science fair project where I first looked into a microscope and just fell … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … The Secondary Metabolites Program targets the vast and …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … funded through  BER Funding Opportunity Announcements ,  Science Focus Areas  (SFA) opportunities, and the  Office of … Early Career Research Program .   If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for … an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a broad range of … of Intent (LOI) from a researcher, briefly describing the project motivation, experimental design, capabilities to be …
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