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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence … Berkeley, California.  Our location at the IGB fosters team science and collaboration with partner organizations such as …
Learn more
FICUS-NERSC/KBASE
… ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to … increasingly collaborative and multidisciplinary nature of DOE mission science projects, this initiative aims to … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …
Learn more
Natural Prodcast Episode 10: A Primer on Genome Mining
Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome back … to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … genome mining is, if I want to explain that to someone who doesn’t know much about genetics or anything else, science …
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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … & quality requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation … emails as raw sequence data becomes available, and as analysis is completed. You can view the status of your …
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Natural Prodcast Episode 11: Marnix Medema
Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Hey there, … up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of … with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. … in living systems, particularly as they relate to DOE missions in the bioeconomy, sustainability, and …
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CSP Large Scale Call
The Community Science Program Large Scale Call is focused on genomic … cycling, and biogeochemistry — questions of relevance to DOE’s Office of Biological and Environmental Research (BER) … that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals …
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Frequently Asked Questions: Proposal Submission
… go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … countries (Iran, North Korea, Cuba, and Syria), need DOE permission and authorization from other U.S. government … contact info is available through our Proposal Page , Science Programs pages, or please contact us with your …
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Micro-Scale Applications Group
Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope … cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical … or the submission of sequencing data for synthesis – the DOE requires that all work performed in its User Facilities …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … Alison is no longer with us… She’s alive! She just doesn’t work for JGI anymore! [LAUGHTER] AARON PURI: Yeah. …
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