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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. … of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … explored to predict microbial lifestyles using AI-driven analysis of such datasets. The program also collaborates …
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Natural Prodcast Episode 16: Marcy Balunas
… I didn’t know how to get towards that.  Organic chemistry doesn’t really help with getting to something other than the … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t … we talked and I’ve noticed that you stay focused on the science and I think that’s great. But I spend a lot of time …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity Announcements ,  Science Focus Areas  (SFA) opportunities, and the  Office of … long as they have a scientific question that is relevant to DOE missions.  Learn more about this opportunity . …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome back … to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … genome mining is, if I want to explain that to someone who doesn’t know much about genetics or anything else, science …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. … in living systems, particularly as they relate to DOE missions in the bioeconomy, sustainability, and …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … & quality requirements for samples submitted to the DOE JGI. DNA Preparation Guidelines RNA Preparation …
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Natural Prodcast Episode 11: Marnix Medema
… Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Hey there, … up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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FICUS-NERSC/KBASE
… ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … the other participating facilities, is then forwarded to DOE for final approval.  Following DOE approval, project …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.  … capabilities of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive … research interests that integrate genomics with nanoscale science in the area of critical minerals and materials. …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical … Please review our FAQ in advance of contacting the PMO office.  … or the submission of sequencing data for synthesis – the DOE requires that all work performed in its User Facilities …
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