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Natural Prodcast Episode 2: The Primer, Part 2
… a little bit more giving. DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let us know!  …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a … and no granting of funds. All data is made publicly available in accordance with  JGI’s Data Policy . In cases where … Capabilities for FICUS Research describes the resources available from all the facilities participating in the FY25 …
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W. Berkeley Kauffman
Berkeley is responsible for receiving and processing user …
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Natural Prodcast Episode 6: Marc Chevrette
… the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence … these pathways are yet. So there’s still a lot to be discovered. And even the ones that may look like they don’t … this program. Like how – is like Jo just the ambassador of microorganisms in soil and – MARC: That is a perfect way to …
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Natural Prodcast Episode 5: Brad Moore
… enjoyed what he was doing so I wanted to be part of that discovery, and that magic that he was showing, and in his … Sequencing Program, and they worked with us to sequence two genomes. Those were of Salinospora tropica and arenicola . … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let us know!  …
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Natural Prodcast Episode 22: Alison Narayan
… the biological properties that these molecules have and discover what’s possible from them. Because we have all of … a sliver of the molecules nature provides to us. But in my lab, we like to ask questions about what don’t we know about this molecule. How do we discover more about what it can do, and as chemists take those …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… as this previously retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant … There, standing at a safe distance, with proper face covering, was JGI’s Administrative Services Group lead …
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JGI Portals
… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … for comparative analysis and annotation of all publicly available genomes from three domains of life, in a uniquely … offers the largest publicly available collection of Uncultivated Viral Genomes, derived from genomes, …
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Data Policy
Community Science Program (CSP), Facilities Integrating Collaborations for User Science (FICUS) initiative, Director’s … … Embargo : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted to proposal PIs, Co-PIs, and collaborators of any given proposal. Third parties (often …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant Professor at … Communications paper that builds off their early collaborations that could help crop breeders and researchers … developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their …
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Metabolomics
… sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics … you can expect from your results as well as our library standards. … Metabolite Analysis & Metabolomics …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… on plants and microbes, Trent Northen’s group at Berkeley Lab created a fabricated ecosystem – an EcoFAB. These small … College to see EcoFABs in action in Jill Bouchard’s BIO 21 lab course. …
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