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… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … our understanding of microbial ecology and metabolism by elucidating the functional potential of hard-to-culture …

… biology. The collaborations present exciting possibilities for scientific exploration, granting access to diverse datasets that deepen our understanding of how organisms … ensure platforms are future-ready for advancements enabled by artificial intelligence and other tools. By bringing …

… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … can just mediate so many kinds of interactions. And by understanding them, we can promote the health and …

… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar … to large ecosystem-level processes for the first time. By collecting data from 27 different poplar ( Populus … to stabilizing streambanks, wildlife habitats and water-quality regulation. Focusing on the rhizosphere and …

… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science … of complex biological, earth, and environmental systems for energy and infrastructure security. In complement to … infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community …

… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book … effort would be far more effective in achieving higher quality results compared to smaller individual efforts. This … The team used all the publicly available metatranscriptome datasets from the JGI’s Integrated Microbial Genomes & …

… can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by Science Program.  … come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online using the …

… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could … team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, … in this group expanded 10-fold from just 205 genomes, redefining the phylogenetic tree of giant viruses. Metabolic …

… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … in stores and online, and there’s an audio version, read by Cassandra, and the paperback version will be available in … primates should they pass the next steps in terms of live virus testing. So having that ability and willingness to …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … of the claimed genome sequences. This opportunity, provided by the Joint Genome Institute, builds upon thousands of … analysis, visualization and interpretation using public datasets.  …

… Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing … pipelines. This includes advanced sample management (quality assurance/quality control [QA/QC]), large-scale liquid handling … An assay used for profiling transcription factor binding sites across …