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… project manager Miranda Harmon-Smith, who helps shepherd CSP projects along. …

… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …

Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to selectively isolate and sequence microbial aggregates after first imaging with various …

Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … The program also explores microeukaryotic members of microbial communities, cataloging gene markers, and …

… described in this webinar only offered through the CSP Functional Genomics call? A(nswer): It’s also possible … capabilities in other calls such as the  annual large-scale CSP call or through the  “Facilities Integrating …

JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …

… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … provides tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in … with functional annotation, taxonomic classification, and microbial host predictions.  … The Mycocosm web portal …

Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research … the world, playing key roles in regulating global nutrient cycles. The information gained from understanding the …

The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to … genetic basis of functional traits in sphagnum growth and decomposition is critical to predicting the ecosystem response to climate change. Through the CSP, researchers are aiming to have two high quality …

… has been doing work in secondary metabolism. The very first CSP I ever worked on back in Brad’s lab, we talked about it … was the Salinispora genome project. And that was a JGI CSP project. They sequenced that genome for us at a time … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …

… right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … We’re looking at a schematic of different pathways in a microbial cell, it looks like. It could be a eukaryotic … I’m looking at it with, you know, it’s within a species or microbial population, you have some set of shared traits …

… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …