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Natural Prodcast Episode 2: The Primer, Part 2
… through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have secondary metabolism. They …
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Special Initiatives & Programs
… and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … interested in better characterizing the role endosymbiotic bacteria play on mating habits of Mucoromycota fungi, and their effects on these oil-producing species. …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass ( …
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Mission
… of University and Research; all specimens collected and fungi isolated are preserved in the Culture Collection of … biomass as a clean, renewable and sustainable alternative source for biofuels and bioproducts. Such biofuels … energy and environmental mission objectives. Fungi, algae, bacteria, archaea, viruses, and microbial communities of …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… find, things that are of interest. And usually, in terms of bacteria and secondary metabolism, those things that we want … We need treatments for humans. And it just so happens that bacteria make a lot of the kinds of molecules that humans … in the earlier primers. In bacteria, at least, and in most fungi, biosynthetic gene clusters, which are the genes that …
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Viral Genomics Group
… viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions. ISME J. … et al. (2019) Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes. Nature …
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Natural Prodcast Episode 3: The Primer, Part 3
… in Nature and Medicine.” It’s obviously focused more on the bacterial side of the field, and it’s a little hard to find … before. Like, you know, maybe it’s a new culture of a new bacteria that you pulled from the soil, maybe it’s, you … been shared for a long time by many, many bacteria – and fungi and plants. And so that’s the power and the promise …
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Data Policy
FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science …
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DNA Synthesis Program
… and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced … and to conduct comparative and genome-centric analyses of fungi and community annotation. … Phytozome is the JGI's …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative … with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and transcriptome … remained largely untouched until seven years later. In 2018, as members of the ZyGoLife consortium , my colleagues …
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Microbial Community Structure and Functional Potential in Cultivated and Native Tallgrass Prairie Soils of the Midwestern United States
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